EnhancerDB
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  3. rs200488368[chr2:26227142]
Enhancers that have rs200488368[chr2:26227142]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26217845 26245475 enh18363
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200488368[chr2:26227142]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26227132 26227145 DUXA JASPAR yes 72515421
chr2 26227133 26227144 DUX4 JASPAR yes 72515422
chr2 26227133 26227144 PHOX2A JASPAR yes 72515423
chr2 26227133 26227144 PROP1 JASPAR yes 72515424
chr2 26227135 26227150 HNF1A JASPAR yes 72515425
chr2 26227136 26227149 HNF1B JASPAR yes 72515426
chr2 26227136 26227150 POU4F1 JASPAR yes 72515427
chr2 26227136 26227152 POU4F3 JASPAR yes 72515428
chr2 26227137 26227148 PHOX2A JASPAR yes 72515429
chr2 26227137 26227148 PROP1 JASPAR yes 72515430
chr2 26227140 26227152 MEF2D JASPAR yes 72515431
chr2 26227141 26227151 MEF2A JASPAR yes 72515432
Genes associated with rs200488368[chr2:26227142], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More