EnhancerDB
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  3. rs200513671[chr2:28940943]
Enhancers that have rs200513671[chr2:28940943]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs200513671[chr2:28940943]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28940935 28940956 IRF1 JASPAR yes 72673249
chr2 28940939 28940954 PRDM1 JASPAR yes 72673250
chr2 28940939 28940960 IRF1 JASPAR yes 72673251
chr2 28940940 28940961 ZNF263 JASPAR yes 72673252
chr2 28940941 28940962 IRF1 JASPAR yes 72673253
chr2 28940942 28940963 ZNF263 JASPAR yes 72673254
chr2 28940943 28940958 PRDM1 JASPAR yes 72673255
Genes associated with rs200513671[chr2:28940943], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More