EnhancerDB
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  3. rs200518064[chr2:26235485]
Enhancers that have rs200518064[chr2:26235485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26217845 26245475 enh18363
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200518064[chr2:26235485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26234841 26235800 EP300 UCSC Txn Factor no Conserved 108431416
chr2 26234895 26235754 TCF12 UCSC Txn Factor no Conserved 108431417
chr2 26234945 26235706 GATA3 UCSC Txn Factor no Conserved 108431418
chr2 26234956 26235730 SIN3AK20 UCSC Txn Factor no Conserved 108431419
chr2 26234982 26235791 TCF7L2 UCSC Txn Factor no Conserved 108431420
chr2 26235014 26235712 FOSL2 UCSC Txn Factor no Conserved 108431421
chr2 26235028 26235583 BCL3 UCSC Txn Factor no Conserved 108431422
chr2 26235088 26235716 ATF3 UCSC Txn Factor no Conserved 108431423
chr2 26235283 26235563 MAFF UCSC Txn Factor no Conserved 108431424
chr2 26235283 26235583 MAFK UCSC Txn Factor no Conserved 108431425
chr2 26235340 26235796 JUND UCSC Txn Factor no Conserved 108431426
chr2 26235484 26235490 LEF1 TRANSFAC yes 72516464
chr2 26235484 26235490 SOX10 JASPAR yes 72516465
chr2 26235484 26235499 FOXA1 JASPAR yes 72516466
chr2 26235485 26235496 FOXB1 JASPAR yes 72516467
Genes associated with rs200518064[chr2:26235485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More