EnhancerDB
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  3. rs200519104[chr16:29284942]
Enhancers that have rs200519104[chr16:29284942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs200519104[chr16:29284942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29284565 29285678 ZNF143 GTRD no Epithelial (MCF-7) 21702101
chr16 29284565 29285678 ZNF143 GTRD no Epithelial (MCF-7) 108191401
chr16 29284636 29285176 ZNF274 GTRD no Blood (GM12878) 108191402
chr16 29284780 29285808 ZNF274 GTRD no Liver (HepG2) 21702103
chr16 29284780 29285808 ZNF274 GTRD no Liver (HepG2) 108191403
chr16 29284856 29285267 ZNF274 GTRD no Blood (GM12878) 108191404
chr16 29284866 29285646 TCF7L2 GTRD no Colon (HCT116) 108191405
chr16 29284916 29285590 TCF7L2 GTRD no Colon (HCT116) 108191406
chr16 29284919 29285275 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191407
chr16 29284927 29285337 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108191408
chr16 29284931 29285820 ZNF274 GTRD no Liver (HepG2) 21702104
chr16 29284931 29285820 ZNF274 GTRD no Liver (HepG2) 108191409
chr16 29284938 29284949 BATF JASPAR yes 10256772
Genes associated with rs200519104[chr16:29284942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More