EnhancerDB
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  3. rs200545559[chr2:232489698]
Enhancers that have rs200545559[chr2:232489698]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs200545559[chr2:232489698]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232489679 232489700 IRF1 JASPAR yes 81727781
chr2 232489680 232489701 IRF1 JASPAR yes 81727783
chr2 232489681 232489702 IRF1 JASPAR yes 81727785
chr2 232489685 232489700 FOXP1 JASPAR yes 81727786
chr2 232489685 232489706 IRF1 JASPAR yes 81727787
chr2 232489686 232489701 FOXP1 JASPAR yes 81727788
chr2 232489686 232489707 IRF1 JASPAR yes 81727789
chr2 232489687 232489708 IRF1 JASPAR yes 81727790
chr2 232489690 232489704 SPIC JASPAR yes 81727791
chr2 232489691 232489712 IRF1 JASPAR yes 81727792
chr2 232489693 232489698 ETS2 TRANSFAC yes 81727793
chr2 232489695 232489710 FOXP1 JASPAR yes 81727794
chr2 232489696 232489711 FOXP1 JASPAR yes 81727795
chr2 232489697 232489712 FOXP1 JASPAR yes 81727796
Genes associated with rs200545559[chr2:232489698], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More