EnhancerDB
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  3. rs200549646[chr12:125165123]
Enhancers that have rs200549646[chr12:125165123]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125156845 125176489 enh15094
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200549646[chr12:125165123]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125165116 125165126 SP1 JASPAR yes 124407836
chr12 125165116 125165126 ZNF740 JASPAR yes 124407837
chr12 125165117 125165127 SP1 JASPAR yes 124407838
chr12 125165117 125165127 ZNF740 JASPAR yes 124407839
chr12 125165118 125165128 ZNF740 JASPAR yes 124407840
chr12 125165121 125165134 NFKB1 JASPAR yes 124407841
chr12 125165121 125165134 NFKB2 JASPAR yes 124407842
Genes associated with rs200549646[chr12:125165123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More