EnhancerDB
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  3. rs200555525[chr11:13118475]
Enhancers that have rs200555525[chr11:13118475]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 13110005 13145006 enh28608
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs200555525[chr11:13118475]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 13117124 13119386 TCF7L2 GTRD no Colon (HCT116) 21472306
chr11 13117759 13119150 ZBTB33 GTRD no Lung (A549) 21472307
chr11 13117799 13119168 ZBTB33 GTRD no Lung (A549) 21472308
chr11 13117821 13119127 ZBTB33 GTRD no Lung (A549) 21472309
chr11 13117832 13119093 ZBTB33 GTRD no Brain (SK-N-SH) 21472310
chr11 13117858 13119138 ZBTB33 GTRD no Lung (A549) 21472311
chr11 13117861 13118791 ZBTB33 GTRD no Brain (SK-N-SH) 21472312
chr11 13117890 13118910 ZBTB33 GTRD no Brain (SK-N-SH) 21472313
chr11 13117897 13119044 ZBTB33 GTRD no Brain (SK-N-SH) 21472314
chr11 13117905 13118949 ZBTB33 GTRD no Lung (A549) 21472315
chr11 13117907 13118982 ZBTB33 GTRD no Brain (SK-N-SH) 21472316
chr11 13117907 13119238 TEF1 GTRD no Bone (Osteoblast) 21472317
chr11 13117913 13118729 ZBTB33 GTRD no Lung (A549) 21472318
chr11 13117914 13118802 ZBTB33 GTRD no Brain (SK-N-SH) 21472319
chr11 13117917 13118485 ZBTB33 GTRD no Lung (A549) 21472320
chr11 13117922 13119000 ZBTB33 GTRD no Lung (A549) 21472321
chr11 13117924 13119102 ZBTB33 GTRD no Brain (SK-N-SH) 21472322
chr11 13117929 13118884 ZBTB33 GTRD no Brain (SK-N-SH) 21472323
chr11 13117947 13118612 ERG GTRD no Prostate (RWPE1) 21472324
chr11 13117968 13119054 ZBTB33 GTRD no Brain (SK-N-SH) 21472325
chr11 13117971 13119087 ZBTB33 GTRD no Lung (A549) 21472326
chr11 13117987 13119063 ZBTB33 GTRD no Brain (SK-N-SH) 21472327
chr11 13118044 13118845 ZBTB33 GTRD no Brain (SK-N-SH) 21472329
chr11 13118053 13118693 ZNF274 GTRD no Cervix (HeLa-S3) 21472330
chr11 13118058 13118893 ZBTB33 GTRD no Brain (SK-N-SH) 21472331
chr11 13118063 13118894 MYOD GTRD no Muscle (Myoblast) 21472333
chr11 13118067 13118967 ZBTB33 GTRD no Brain (SK-N-SH) 21472334
chr11 13118071 13118789 ZBTB33 GTRD no Brain (SK-N-SH) 21472335
chr11 13118113 13118720 ZBTB33 GTRD no Lung (A549) 21472336
chr11 13118122 13118897 ZBTB33 GTRD no Lung (A549) 21472337
chr11 13118123 13118524 TCF7L2 GTRD no Colon (HCT116) 21472338
chr11 13118130 13118853 ZBTB33 GTRD no Lung (A549) 21472339
chr11 13118180 13118834 ZBTB33 GTRD no Brain (SK-N-SH) 21472340
chr11 13118192 13118927 ZNF274 GTRD no Cervix (HeLa-S3) 21472341
chr11 13118193 13118531 ZNF274 GTRD no Cervix (HeLa-S3) 21472342
chr11 13118326 13119391 AR GTRD no Prostate (PC-3) 21472343
chr11 13118467 13118961 ZNF274 GTRD no Liver (HepG2) 21472344
chr11 13118475 13118487 FOXC2 JASPAR yes 37503168
Genes associated with rs200555525[chr11:13118475], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More