EnhancerDB
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  3. rs200567229[chr5:14231953]
Enhancers that have rs200567229[chr5:14231953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 14197965 14242825 enh22053
Brain (SK-N-MC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200567229[chr5:14231953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 14231947 14231968 IRF1 JASPAR yes 61027191
chr5 14231948 14231969 IRF1 JASPAR yes 61027192
chr5 14231952 14231967 FOXP1 JASPAR yes 61027193
chr5 14231952 14231973 IRF1 JASPAR yes 61027194
chr5 14231953 14231968 FOXP1 JASPAR yes 61027195
chr5 14231953 14231974 IRF1 JASPAR yes 61027196
Genes associated with rs200567229[chr5:14231953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More