EnhancerDB
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  3. rs200571109[chr17:78732989]
Enhancers that have rs200571109[chr17:78732989]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs200571109[chr17:78732989]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78732982 78732997 FOXP1 JASPAR yes 56275746
chr17 78732982 78733003 IRF1 JASPAR yes 56275747
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 21797161
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 108307245
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 108307246
chr17 78732988 78732994 TBP TRANSFAC yes 56275748
chr17 78732988 78733009 IRF1 JASPAR yes 56275749
Genes associated with rs200571109[chr17:78732989], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More