EnhancerDB
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  3. rs200623161[chr1:211780598]
Enhancers that have rs200623161[chr1:211780598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 211772625 211795095 enh907
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 211780151 211780642 vista4970
VISTA
Transcript factors that have rs200623161[chr1:211780598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 211779549 211780748 POLR2A UCSC Txn Factor no Conserved 107867447
chr1 211779967 211780651 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867449
chr1 211780204 211780644 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376432
chr1 211780204 211780644 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867454
chr1 211780212 211780788 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376433
chr1 211780212 211780788 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867455
chr1 211780215 211780635 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867457
chr1 211780239 211780615 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376435
chr1 211780239 211780615 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867459
chr1 211780246 211780616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867460
chr1 211780251 211780621 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376436
chr1 211780251 211780621 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867461
chr1 211780274 211780604 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867468
chr1 211780274 211780614 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107867469
chr1 211780293 211780657 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376442
chr1 211780293 211780657 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867473
chr1 211780367 211780602 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376448
chr1 211780367 211780602 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867482
chr1 211780371 211780714 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21376449
chr1 211780371 211780714 PHF8 UCSC Txn Factor no Conserved 107867483
chr1 211780371 211780714 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867484
chr1 211780587 211780600 SMAD2 JASPAR yes 35070387
chr1 211780587 211780600 SMAD2 JASPAR yes 118451540
chr1 211780592 211780613 ZNF263 JASPAR yes 35070388
chr1 211780592 211780613 ZNF263 JASPAR yes 118451541
chr1 211780594 211780609 PRDM1 JASPAR yes 35070389
chr1 211780594 211780609 PRDM1 JASPAR yes 118451542
chr1 211780598 211780613 PRDM1 JASPAR yes 35070390
chr1 211780598 211780613 PRDM1 JASPAR yes 118451543
Genes associated with rs200623161[chr1:211780598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More