EnhancerDB
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  3. rs200651847[chr5:159896071]
Enhancers that have rs200651847[chr5:159896071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159884219 159899002 enh22766
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs200651847[chr5:159896071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159894278 159897191 POLR2A UCSC Txn Factor no Conserved 108537290
chr5 159896062 159896072 EN2 JASPAR yes 67359943
chr5 159896062 159896072 ESX1 JASPAR yes 67359944
chr5 159896062 159896072 GBX1 JASPAR yes 67359945
chr5 159896062 159896072 GBX2 JASPAR yes 67359946
chr5 159896062 159896072 HESX1 JASPAR yes 67359947
chr5 159896062 159896072 LBX2 JASPAR yes 67359948
chr5 159896062 159896072 LHX2 JASPAR yes 67359949
chr5 159896062 159896072 RAX JASPAR yes 67359950
chr5 159896063 159896071 BARX1 JASPAR yes 67359951
chr5 159896063 159896071 BSX JASPAR yes 67359952
chr5 159896063 159896071 EN1 JASPAR yes 67359953
chr5 159896063 159896071 ISX JASPAR yes 67359954
chr5 159896063 159896071 LHX9 JASPAR yes 67359955
chr5 159896063 159896071 MSX1 JASPAR yes 67359956
chr5 159896063 159896071 MSX2 JASPAR yes 67359957
chr5 159896063 159896071 PRRX1 JASPAR yes 67359958
chr5 159896063 159896071 RAX2 JASPAR yes 67359959
chr5 159896063 159896071 SHOX JASPAR yes 67359960
chr5 159896065 159896075 NFIA JASPAR yes 67359961
chr5 159896067 159896073 NFIC JASPAR yes 67359962
chr5 159896071 159896089 IRF2 JASPAR yes 67359963
Genes associated with rs200651847[chr5:159896071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More