EnhancerDB
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  3. rs200743012[chr12:52531845]
Enhancers that have rs200743012[chr12:52531845]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs200743012[chr12:52531845]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52531458 52531962 TCF7L2 GTRD no Colon (HCT116) 21546278
chr12 52531827 52531848 ZNF263 JASPAR yes 120920557
chr12 52531834 52531855 ZNF263 JASPAR yes 120920559
Genes associated with rs200743012[chr12:52531845], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 52771596 52779436 - KRT84 ENSG00000161849.3 52779436 239751 Esophagus 0.252817 12085