EnhancerDB
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  3. rs200770380[chr1:178998035]
Enhancers that have rs200770380[chr1:178998035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178994785 179010519 enh771
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Blood (OCI-LY7) Blood (GM12878) Adrenal Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs200770380[chr1:178998035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178998029 178998044 FOXP1 JASPAR yes 33461583
chr1 178998029 178998050 IRF1 JASPAR yes 33461584
chr1 178998030 178998045 FOXP1 JASPAR yes 33461585
chr1 178998033 178998048 STAT2 JASPAR yes 33461586
Genes associated with rs200770380[chr1:178998035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More