EnhancerDB
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  3. rs200772604[chr5:149853428]
Enhancers that have rs200772604[chr5:149853428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149834702 149859546 enh8799
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200772604[chr5:149853428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149853408 149853428 RREB1 JASPAR yes 66882607
chr5 149853411 149853431 RREB1 JASPAR yes 66882608
chr5 149853412 149853432 RREB1 JASPAR yes 66882610
chr5 149853415 149853435 RREB1 JASPAR yes 66882611
chr5 149853416 149853428 FOXI1 JASPAR yes 66882612
chr5 149853416 149853436 RREB1 JASPAR yes 66882613
chr5 149853417 149853432 FOXP1 JASPAR yes 66882614
chr5 149853420 149853432 FOXI1 JASPAR yes 66882615
chr5 149853420 149853440 RREB1 JASPAR yes 66882616
Genes associated with rs200772604[chr5:149853428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More