EnhancerDB
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  3. rs200804448[chr1:225942390]
Enhancers that have rs200804448[chr1:225942390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200804448[chr1:225942390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225941037 225946019 STAT3 GTRD no Blood (OCI-LY7) 21385734
chr1 225942359 225943098 SOX2 GTRD no Neural Stem Cells (H9) 21385748
chr1 225942381 225942402 IRF1 JASPAR yes 35767613
chr1 225942384 225942398 SPI1 JASPAR yes 35767614
chr1 225942384 225942405 IRF1 JASPAR yes 35767615
chr1 225942389 225942404 FOXP1 JASPAR yes 35767616
chr1 225942390 225942405 FOXP1 JASPAR yes 35767617
Genes associated with rs200804448[chr1:225942390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More