EnhancerDB
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  3. rs200838588[chr1:9817306]
Enhancers that have rs200838588[chr1:9817306]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9816649 9832635 enh52
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs200838588[chr1:9817306]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9817292 9817307 SCRT1 JASPAR yes 26673768
chr1 9817296 9817317 IRF1 JASPAR yes 26673769
chr1 9817298 9817313 STAT2 JASPAR yes 26673770
chr1 9817301 9817316 FOXP1 JASPAR yes 26673771
chr1 9817302 9817317 FOXP1 JASPAR yes 26673772
chr1 9817303 9817318 FOXP1 JASPAR yes 26673773
chr1 9817304 9817319 FOXP1 JASPAR yes 26673774
chr1 9817305 9817320 FOXP1 JASPAR yes 26673775
Genes associated with rs200838588[chr1:9817306], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More