EnhancerDB
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  3. rs200847950[chr17:62167189]
Enhancers that have rs200847950[chr17:62167189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200847950[chr17:62167189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62167179 62167191 PKNOX1 JASPAR yes 55276267
chr17 62167179 62167191 PKNOX2 JASPAR yes 55276268
chr17 62167179 62167191 TGIF1 JASPAR yes 55276269
chr17 62167179 62167191 TGIF2 JASPAR yes 55276270
chr17 62167182 62167203 IRF1 JASPAR yes 55276271
chr17 62167186 62167189 MYB TRANSFAC yes 55276272
chr17 62167186 62167201 PRDM1 JASPAR yes 55276273
chr17 62167186 62167204 IRF2 JASPAR yes 55276274
Genes associated with rs200847950[chr17:62167189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More