EnhancerDB
  1. Home
  2. SNP
  3. rs200852360[chr5:172163730]
Enhancers that have rs200852360[chr5:172163730]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200852360[chr5:172163730]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172163417 172163883 CTCF UCSC Txn Factor no Conserved 108537469
chr5 172163720 172163735 FOXP1 JASPAR yes 67819901
chr5 172163722 172163737 FOXP1 JASPAR yes 67819902
Genes associated with rs200852360[chr5:172163730], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More