EnhancerDB
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  3. rs200855433[chr6:36583628]
Enhancers that have rs200855433[chr6:36583628]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36569515 36588579 enh23193
Liver Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs200855433[chr6:36583628]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36583610 36583631 IRF1 JASPAR yes 101349548
chr6 36583612 36583633 IRF1 JASPAR yes 101349551
chr6 36583615 36583629 STAT1 JASPAR yes 101349552
chr6 36583616 36583630 IRF7 JASPAR yes 101349553
chr6 36583616 36583637 IRF1 JASPAR yes 101349554
chr6 36583617 36583632 FOXP1 JASPAR yes 101349555
chr6 36583617 36583638 IRF1 JASPAR yes 101349556
chr6 36583618 36583633 PRDM1 JASPAR yes 101349557
chr6 36583618 36583639 IRF1 JASPAR yes 101349558
chr6 36583622 36583643 IRF1 JASPAR yes 101349559
chr6 36583623 36583638 FOXP1 JASPAR yes 101349560
chr6 36583623 36583644 IRF1 JASPAR yes 101349561
chr6 36583624 36583645 IRF1 JASPAR yes 101349562
chr6 36583625 36583640 FOXP1 JASPAR yes 101349563
chr6 36583625 36583646 IRF1 JASPAR yes 101349564
chr6 36583626 36583647 IRF1 JASPAR yes 101349565
chr6 36583627 36583642 FOXP1 JASPAR yes 101349566
chr6 36583627 36583648 IRF1 JASPAR yes 101349567
chr6 36583628 36583643 FOXP1 JASPAR yes 101349568
Genes associated with rs200855433[chr6:36583628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More