EnhancerDB
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  3. rs200890677[chr16:11417874]
Enhancers that have rs200890677[chr16:11417874]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11415474 11429815 enh3885
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Kidney Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Muscle (A673)
Transcript factors that have rs200890677[chr16:11417874]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11417864 11417875 HOXA10 JASPAR yes 9505469
chr16 11417865 11417874 CDX1 JASPAR yes 9505470
chr16 11417865 11417876 CDX2 JASPAR yes 9505471
chr16 11417874 11417878 NFE TRANSFAC yes 9505472
chr16 11417874 11417887 SMAD2 JASPAR yes 9505473
Genes associated with rs200890677[chr16:11417874], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More