EnhancerDB
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  3. rs200894427[chr1:236110840]
Enhancers that have rs200894427[chr1:236110840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236091945 236120510 enh12806
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs200894427[chr1:236110840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236109318 236110944 ZNF143 GTRD no Epithelial (MCF-7) 107886443
chr1 236110830 236110851 IRF1 JASPAR yes 36391610
chr1 236110831 236110846 LEF1 JASPAR yes 36391611
chr1 236110831 236110852 IRF1 JASPAR yes 36391612
chr1 236110832 236110846 TCF7L2 JASPAR yes 36391613
chr1 236110837 236110858 IRF1 JASPAR yes 36391614
chr1 236110839 236110854 PRDM1 JASPAR yes 36391615
chr1 236110839 236110854 STAT2 JASPAR yes 36391616
chr1 236110840 236110854 SPIC JASPAR yes 36391617
chr1 236110840 236110854 STAT1 JASPAR yes 36391618
Genes associated with rs200894427[chr1:236110840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More