EnhancerDB
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  3. rs2009112[chr1:218553529]
Enhancers that have rs2009112[chr1:218553529]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218537025 218560381 enh12670
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs2009112[chr1:218553529]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218552817 218553941 ZNF274 GTRD no Bone Marrow (K562) 107870214
chr1 218552843 218553962 ZNF143 GTRD no Epithelial (MCF-7) 21380725
chr1 218552843 218553962 ZNF143 GTRD no Epithelial (MCF-7) 107870215
chr1 218552952 218553751 ZNF143 GTRD no Epithelial (MCF-7) 21380726
chr1 218552952 218553751 ZNF143 GTRD no Epithelial (MCF-7) 107870216
chr1 218552971 218553882 ZNF143 GTRD no Epithelial (MCF-7) 21380727
chr1 218552971 218553882 ZNF143 GTRD no Epithelial (MCF-7) 107870217
chr1 218552972 218554030 ZNF143 GTRD no Epithelial (MCF-7) 21380728
chr1 218552972 218554030 ZNF143 GTRD no Epithelial (MCF-7) 107870218
chr1 218553010 218553763 ZNF274 GTRD no Bone Marrow (K562) 107870219
chr1 218553014 218554122 ZNF143 GTRD no Epithelial (MCF-7) 21380729
chr1 218553014 218554122 ZNF143 GTRD no Epithelial (MCF-7) 107870220
chr1 218553020 218553909 ZNF143 GTRD no Epithelial (MCF-7) 21380730
chr1 218553020 218553909 ZNF143 GTRD no Epithelial (MCF-7) 107870221
chr1 218553046 218553753 ZNF274 GTRD no Bone Marrow (K562) 107870222
chr1 218553049 218553791 ZNF274 GTRD no Liver (HepG2) 21380731
chr1 218553049 218553791 ZNF274 GTRD no Liver (HepG2) 107870223
chr1 218553169 218553823 ZNF274 GTRD no Bone Marrow (K562) 107870224
Genes associated with rs2009112[chr1:218553529], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More