EnhancerDB
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  3. rs200954323[chr19:6100846]
Enhancers that have rs200954323[chr19:6100846]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200954323[chr19:6100846]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6100834 6100846 FOXC2 JASPAR yes 112257190
chr19 6100834 6100848 ONECUT1 JASPAR yes 112257191
chr19 6100834 6100848 ONECUT2 JASPAR yes 112257192
chr19 6100834 6100848 ONECUT3 JASPAR yes 112257193
chr19 6100835 6100846 FOXB1 JASPAR yes 112257196
chr19 6100835 6100846 FOXC1 JASPAR yes 112257197
chr19 6100838 6100851 DUXA JASPAR yes 112257198
chr19 6100839 6100850 PHOX2A JASPAR yes 112257199
chr19 6100842 6100852 ALX3 JASPAR yes 112257200
chr19 6100842 6100852 GSX2 JASPAR yes 112257201
chr19 6100842 6100852 MIXL1 JASPAR yes 112257202
chr19 6100842 6100852 MNX1 JASPAR yes 112257203
chr19 6100843 6100851 ISX JASPAR yes 112257204
chr19 6100843 6100851 LHX9 JASPAR yes 112257205
chr19 6100843 6100851 LMX1B JASPAR yes 112257206
chr19 6100843 6100851 PRRX1 JASPAR yes 112257207
chr19 6100843 6100851 RAX2 JASPAR yes 112257208
chr19 6100843 6100851 SHOX JASPAR yes 112257209
chr19 6100843 6100851 UNCX JASPAR yes 112257210
chr19 6100843 6100856 DUXA JASPAR yes 112257211
chr19 6100844 6100855 DUX4 JASPAR yes 112257212
chr19 6100844 6100855 PHOX2A JASPAR yes 112257213
chr19 6100844 6100855 PROP1 JASPAR yes 112257214
chr19 6100846 6100851 MYB TRANSFAC yes 112257215
Genes associated with rs200954323[chr19:6100846], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More