EnhancerDB
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  3. rs200959508[chr16:89429890]
Enhancers that have rs200959508[chr16:89429890]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200959508[chr16:89429890]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89429878 89429893 MEF2C JASPAR yes 12336732
chr16 89429878 89429899 IRF1 JASPAR yes 12336733
chr16 89429879 89429890 PHOX2A JASPAR yes 12336734
chr16 89429879 89429890 PROP1 JASPAR yes 12336735
chr16 89429880 89429892 MEF2A JASPAR yes 12336736
chr16 89429884 89429905 IRF1 JASPAR yes 12336737
chr16 89429886 89429901 FOXP1 JASPAR yes 12336738
chr16 89429887 89429902 FOXP1 JASPAR yes 12336739
chr16 89429888 89429894 TBP TRANSFAC yes 12336740
chr16 89429889 89429904 FOXP1 JASPAR yes 12336741
Genes associated with rs200959508[chr16:89429890], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More