EnhancerDB
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  3. rs200963176[chr1:225953231]
Enhancers that have rs200963176[chr1:225953231]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200963176[chr1:225953231]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225953216 225953235 PAX5 JASPAR yes 35769309
chr1 225953225 225953235 POU6F2 JASPAR yes 35769310
chr1 225953226 225953236 EMX1 JASPAR yes 35769311
chr1 225953226 225953236 EMX2 JASPAR yes 35769312
chr1 225953226 225953236 ESX1 JASPAR yes 35769313
chr1 225953226 225953236 EVX1 JASPAR yes 35769314
chr1 225953226 225953236 EVX2 JASPAR yes 35769315
chr1 225953226 225953236 GBX2 JASPAR yes 35769316
chr1 225953226 225953236 HESX1 JASPAR yes 35769317
chr1 225953226 225953236 HOXA2 JASPAR yes 35769318
chr1 225953226 225953236 HOXB2 JASPAR yes 35769319
chr1 225953226 225953236 HOXB3 JASPAR yes 35769320
chr1 225953226 225953236 LHX2 JASPAR yes 35769321
chr1 225953226 225953236 LHX6 JASPAR yes 35769322
chr1 225953226 225953236 MEOX1 JASPAR yes 35769323
chr1 225953226 225953236 MEOX2 JASPAR yes 35769324
chr1 225953226 225953236 POU6F1 JASPAR yes 35769325
chr1 225953226 225953236 RAX JASPAR yes 35769326
chr1 225953227 225953235 LBX1 JASPAR yes 35769327
chr1 225953227 225953235 PDX1 JASPAR yes 35769328
chr1 225953227 225953235 VAX1 JASPAR yes 35769329
chr1 225953227 225953235 VAX2 JASPAR yes 35769330
chr1 225953227 225953235 VSX1 JASPAR yes 35769331
chr1 225953227 225953235 VSX2 JASPAR yes 35769332
chr1 225953228 225953239 PHOX2A JASPAR yes 35769333
chr1 225953228 225953239 PROP1 JASPAR yes 35769334
Genes associated with rs200963176[chr1:225953231], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More