EnhancerDB
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  3. rs200967722[chr19:2541583]
Enhancers that have rs200967722[chr19:2541583]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200967722[chr19:2541583]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2540170 2541619 ZNF143 GTRD no Epithelial (MCF-7) 21836486
chr19 2540170 2541619 ZNF143 GTRD no Epithelial (MCF-7) 108361548
chr19 2540177 2543122 TCF7L2 GTRD no Colon (HCT116) 21836487
chr19 2540177 2543122 TCF7L2 GTRD no Colon (HCT116) 108361549
chr19 2540208 2543082 TCF7L2 GTRD no Colon (HCT116) 21836489
chr19 2540208 2543082 TCF7L2 GTRD no Colon (HCT116) 108361551
chr19 2540241 2543099 TCF7L2 GTRD no Colon (HCT116) 21836490
chr19 2540241 2543099 TCF7L2 GTRD no Colon (HCT116) 108361553
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 21836499
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361562
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361563
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361564
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 21836500
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361565
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361566
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361567
chr19 2540353 2541586 ZNF274 GTRD no Cervix (HeLa-S3) 21836503
chr19 2540353 2541586 ZNF274 GTRD no Cervix (HeLa-S3) 108361571
chr19 2540379 2541623 ZBTB33 GTRD no Brain (SK-N-SH) 21836507
chr19 2540379 2541623 ZBTB33 GTRD no Brain (SK-N-SH) 108361575
chr19 2540379 2542161 ZBTB33 GTRD no Lung (A549) 21836508
chr19 2540379 2542161 ZBTB33 GTRD no Lung (A549) 108361576
chr19 2540405 2541623 TCF7L2 GTRD no Colon (HCT116) 21836513
chr19 2540405 2541623 TCF7L2 GTRD no Colon (HCT116) 108361582
chr19 2540449 2541615 ZBTB33 GTRD no Lung (A549) 21836524
chr19 2540449 2541615 ZBTB33 GTRD no Lung (A549) 108361594
chr19 2540513 2541605 ZNF274 GTRD no Cervix (HeLa-S3) 21836551
chr19 2540513 2541605 ZNF274 GTRD no Cervix (HeLa-S3) 108361621
chr19 2540597 2541724 TCF7L2 GTRD no Colon (HCT116) 21836613
chr19 2540597 2541724 TCF7L2 GTRD no Colon (HCT116) 108361683
chr19 2541572 2541587 FOXP1 JASPAR yes 112071918
Genes associated with rs200967722[chr19:2541583], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More