EnhancerDB
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  3. rs200978087[chr1:234799217]
Enhancers that have rs200978087[chr1:234799217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234788925 234800115 enh12793
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs200978087[chr1:234799217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234798997 234799339 MYOD GTRD no Muscle (Myoblast) 21395629
chr1 234799123 234799389 ZNF274 GTRD no Cervix (HeLa-S3) 21395630
chr1 234799164 234799626 ZNF274 GTRD no Liver (HepG2) 21395631
chr1 234799168 234799624 ZNF274 GTRD no Liver (HepG2) 21395632
chr1 234799174 234799577 ZNF274 GTRD no Liver (HepG2) 21395633
chr1 234799181 234799616 ZNF274 GTRD no Liver (HepG2) 21395634
chr1 234799184 234799605 ZNF274 GTRD no Liver (HepG2) 21395635
chr1 234799185 234799582 ZNF274 GTRD no Liver (HepG2) 21395636
chr1 234799185 234799611 ZNF274 GTRD no Liver (HepG2) 21395637
chr1 234799189 234799636 ZNF274 GTRD no Liver (HepG2) 21395638
chr1 234799197 234799218 ZNF263 JASPAR yes 36300318
chr1 234799198 234799219 ZNF263 JASPAR yes 36300319
chr1 234799202 234799517 ZNF274 GTRD no Liver (HepG2) 21395639
chr1 234799203 234799224 IRF1 JASPAR yes 36300322
chr1 234799206 234799220 SPI1 JASPAR yes 36300324
chr1 234799206 234799227 IRF1 JASPAR yes 36300325
chr1 234799209 234799223 SPI1 JASPAR yes 36300326
chr1 234799209 234799230 IRF1 JASPAR yes 36300327
chr1 234799210 234799595 ZNF274 GTRD no Liver (HepG2) 21395640
chr1 234799212 234799227 FOXP1 JASPAR yes 36300328
chr1 234799214 234799229 FOXP1 JASPAR yes 36300329
chr1 234799215 234799230 FOXP1 JASPAR yes 36300330
chr1 234799216 234799231 FOXP1 JASPAR yes 36300331
Genes associated with rs200978087[chr1:234799217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More