EnhancerDB
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  3. rs2010300[chr15:41080131]
Enhancers that have rs2010300[chr15:41080131]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41072825 41093715 enh16067
Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs2010300[chr15:41080131]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41080129 41080140 CDX2 JASPAR yes 22953927
chr15 41080130 41080141 HOXA10 JASPAR yes 22953928
chr15 41080131 41080140 CDX1 JASPAR yes 22953929
Genes associated with rs2010300[chr15:41080131], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr15 41060067 41099675 - DNAJC17 ENSG00000104129.5 41099675 0 Esophagus 4.01398e-07 13820