EnhancerDB
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  3. rs201053009[chr6:35566776]
Enhancers that have rs201053009[chr6:35566776]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35560685 35576643 enh9078
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs201053009[chr6:35566776]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35566761 35566776 FOXP1 JASPAR yes 101293675
chr6 35566762 35566777 FOXA1 JASPAR yes 101293676
chr6 35566764 35566776 FOXI1 JASPAR yes 101293680
chr6 35566765 35566779 ONECUT2 JASPAR yes 101293681
chr6 35566765 35566779 ONECUT3 JASPAR yes 101293682
chr6 35566765 35566780 FOXP1 JASPAR yes 101293683
chr6 35566765 35566780 HNF1A JASPAR yes 101293684
chr6 35566766 35566780 POU4F1 JASPAR yes 101293685
chr6 35566766 35566781 FOXA1 JASPAR yes 101293686
chr6 35566766 35566782 POU4F3 JASPAR yes 101293687
chr6 35566767 35566778 FOXB1 JASPAR yes 101293688
chr6 35566767 35566778 FOXC1 JASPAR yes 101293689
chr6 35566767 35566778 PROP1 JASPAR yes 101293690
chr6 35566767 35566779 FOXC2 JASPAR yes 101293691
chr6 35566768 35566780 FOXI1 JASPAR yes 101293692
chr6 35566771 35566786 FOXP1 JASPAR yes 101293693
chr6 35566771 35566786 MEF2C JASPAR yes 101293694
chr6 35566771 35566792 IRF1 JASPAR yes 101293695
chr6 35566772 35566787 MEF2A JASPAR yes 101293696
chr6 35566773 35566785 FOXC2 JASPAR yes 101293697
chr6 35566773 35566785 MEF2A JASPAR yes 101293698
chr6 35566773 35566785 MEF2B JASPAR yes 101293699
chr6 35566773 35566785 MEF2D JASPAR yes 101293700
chr6 35566774 35566784 MEF2A JASPAR yes 101293701
chr6 35566775 35566790 FOXP1 JASPAR yes 101293702
Genes associated with rs201053009[chr6:35566776], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More