EnhancerDB
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  3. rs2010972[chr3:127796005]
Enhancers that have rs2010972[chr3:127796005]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 127788243 127799375 enh35865
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Colon (HCT116) Peripheral Blood (MM.1S) Uterus Thymus
chr3 127795566 127796407 vista42347
VISTA
Transcript factors that have rs2010972[chr3:127796005]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 127795450 127796805 POLR2A UCSC Txn Factor no Conserved 108530273
chr3 127795537 127796213 GATA1 UCSC Txn Factor no Conserved 108530274
chr3 127795676 127796084 CCNT2 UCSC Txn Factor no Conserved 108530275
chr3 127795707 127796042 HMGN3 UCSC Txn Factor no Conserved 108530276
chr3 127795724 127796028 GATA2 UCSC Txn Factor no Conserved 108530277
chr3 127796000 127796013 TFAP2A JASPAR yes 5564848
chr3 127796000 127796013 TFAP2A JASPAR yes 71048398
Genes associated with rs2010972[chr3:127796005], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More