EnhancerDB
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  3. rs201109074[chr19:13963531]
Enhancers that have rs201109074[chr19:13963531]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201109074[chr19:13963531]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13961783 13964126 TCF7L2 GTRD no Colon (HCT116) 21852661
chr19 13961805 13964332 TCF7L2 GTRD no Colon (HCT116) 21852665
chr19 13961822 13964144 TCF7L2 GTRD no Colon (HCT116) 21852666
chr19 13962152 13963540 ZNF274 GTRD no Bone Marrow (K562) 21852723
chr19 13962599 13964143 TCF7L2 GTRD no Colon (HCT116) 21852730
chr19 13962674 13963833 ZNF274 GTRD no Blood (GM12878) 21852731
chr19 13962910 13964136 ZNF143 GTRD no Epithelial (MCF-7) 21852732
chr19 13962984 13963899 TCF7L2 GTRD no Colon (HCT116) 21852733
chr19 13962999 13964156 ZNF274 GTRD no Bone Marrow (K562) 21852734
chr19 13963134 13963574 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852735
chr19 13963149 13963665 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852736
chr19 13963201 13964202 ZNF143 GTRD no Epithelial (MCF-7) 21852737
chr19 13963315 13964007 TCF7L2 GTRD no Colon (HCT116) 21852738
chr19 13963381 13964133 TCF7L2 GTRD no Colon (HCT116) 21852739
chr19 13963383 13963906 TCF7L2 GTRD no Colon (HCT116) 21852740
chr19 13963498 13964152 ZNF274 GTRD no Blood (GM12878) 21852741
chr19 13963526 13964025 TCF7L2 GTRD no Colon (HCT116) 21852742
Genes associated with rs201109074[chr19:13963531], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More