EnhancerDB
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  3. rs201180878[chr1:232079470]
Enhancers that have rs201180878[chr1:232079470]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232052045 232079775 enh12783
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs201180878[chr1:232079470]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232079464 232079485 IRF1 JASPAR yes 36126343
chr1 232079466 232079481 PRDM1 JASPAR yes 36126344
chr1 232079466 232079481 STAT2 JASPAR yes 36126345
chr1 232079466 232079487 IRF1 JASPAR yes 36126346
chr1 232079469 232079484 FOXP1 JASPAR yes 36126347
chr1 232079470 232079485 FOXP1 JASPAR yes 36126348
Genes associated with rs201180878[chr1:232079470], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More