EnhancerDB
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  3. rs201227823[chr17:25561459]
Enhancers that have rs201227823[chr17:25561459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25561345 25577115 enh17059
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201227823[chr17:25561459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25561448 25561469 IRF1 JASPAR yes 53613000
chr17 25561450 25561465 STAT2 JASPAR yes 53613001
chr17 25561451 25561465 STAT1 JASPAR yes 53613002
chr17 25561452 25561467 IRF9 JASPAR yes 53613003
chr17 25561452 25561473 IRF1 JASPAR yes 53613004
chr17 25561453 25561468 FOXP1 JASPAR yes 53613005
chr17 25561453 25561474 IRF1 JASPAR yes 53613006
chr17 25561454 25561469 FOXP1 JASPAR yes 53613007
chr17 25561454 25561475 IRF1 JASPAR yes 53613008
chr17 25561458 25561479 IRF1 JASPAR yes 53613009
chr17 25561459 25561474 FOXP1 JASPAR yes 53613010
Genes associated with rs201227823[chr17:25561459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More