EnhancerDB
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  3. rs201260955[chr12:122502169]
Enhancers that have rs201260955[chr12:122502169]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122495412 122508155 enh2656
Brain (SK-N-MC) Liver Astrocyte Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201260955[chr12:122502169]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122499049 122502193 ZNF143 GTRD no Epithelial (MCF-7) 21579624
chr12 122499067 122502353 ZNF143 GTRD no Epithelial (MCF-7) 21579625
chr12 122499889 122502353 ZNF143 GTRD no Epithelial (MCF-7) 21579637
chr12 122501922 122502172 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579707
chr12 122501983 122502173 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21579708
chr12 122502001 122502511 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579709
chr12 122502014 122502304 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579710
chr12 122502064 122502247 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579711
chr12 122502077 122502246 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579712
chr12 122502163 122502177 CREB3L1 JASPAR yes 124261929
chr12 122502164 122502174 MAX JASPAR yes 124261930
chr12 122502164 122502176 HES5 JASPAR yes 124261931
chr12 122502165 122502175 CLOCK JASPAR yes 124261932
chr12 122502165 122502175 HEY1 JASPAR yes 124261933
chr12 122502165 122502175 HEY2 JASPAR yes 124261934
chr12 122502165 122502175 MAX JASPAR yes 124261935
chr12 122502165 122502175 MLXIPL JASPAR yes 124261936
chr12 122502165 122502175 MLX JASPAR yes 124261937
chr12 122502165 122502175 MNT JASPAR yes 124261938
chr12 122502165 122502175 TFE3 JASPAR yes 124261939
chr12 122502165 122502175 TFEB JASPAR yes 124261940
chr12 122502165 122502175 TFEC JASPAR yes 124261941
chr12 122502165 122502176 USF1 JASPAR yes 124261942
chr12 122502165 122502176 USF2 JASPAR yes 124261943
chr12 122502166 122502176 MAX JASPAR yes 124261944
chr12 122502167 122502172 MYC TRANSFAC yes 124261945
chr12 122502167 122502172 USF1 TRANSFAC yes 124261946
chr12 122502167 122502172 USF2 TRANSFAC yes 124261947
chr12 122502167 122502174 USF1 JASPAR yes 124261948
Genes associated with rs201260955[chr12:122502169], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More