EnhancerDB
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  3. rs201275938[chr2:238112701]
Enhancers that have rs201275938[chr2:238112701]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238097785 238124624 enh19388
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673) Heart
Transcript factors that have rs201275938[chr2:238112701]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238112695 238112709 POU4F1 JASPAR yes 82092192
chr2 238112699 238112712 DUXA JASPAR yes 82092193
chr2 238112700 238112711 DUX4 JASPAR yes 82092194
chr2 238112700 238112711 PHOX2A JASPAR yes 82092195
chr2 238112700 238112711 PROP1 JASPAR yes 82092196
Genes associated with rs201275938[chr2:238112701], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More