EnhancerDB
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  3. rs2013889[chr1:184452580]
Enhancers that have rs2013889[chr1:184452580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 184446505 184469333 enh12467
Brain (SK-N-MC) Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2013889[chr1:184452580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 184452575 184452585 SP1 JASPAR yes 33751305
chr1 184452576 184452583 SP1 TRANSFAC yes 33751306
chr1 184452576 184452586 SP1 JASPAR yes 33751307
chr1 184452576 184452595 CTCF JASPAR yes 33751308
chr1 184452577 184452584 SP1 TRANSFAC yes 33751309
chr1 184452578 184452583 SP1 TRANSFAC yes 33751310
chr1 184452578 184452584 SP1 TRANSFAC yes 33751311
chr1 184452578 184452585 SP1 TRANSFAC yes 33751312
Genes associated with rs2013889[chr1:184452580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More