EnhancerDB
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  3. rs201403072[chr1:201494807]
Enhancers that have rs201403072[chr1:201494807]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201492445 201517481 enh12522
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs201403072[chr1:201494807]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201493607 201494854 ZNF143 GTRD no Epithelial (MCF-7) 107856544
chr1 201493608 201494912 ZNF143 GTRD no Epithelial (MCF-7) 107856545
chr1 201493781 201494962 ZNF274 GTRD no Liver (HepG2) 107856546
chr1 201493957 201494849 TCF7L2 GTRD no Colon (HCT116) 21364490
chr1 201493957 201494849 TCF7L2 GTRD no Colon (HCT116) 107856549
chr1 201493959 201494917 ZNF274 GTRD no Liver (HepG2) 107856550
chr1 201494001 201494924 ZNF274 GTRD no Liver (HepG2) 107856553
chr1 201494063 201494890 ZNF143 GTRD no Epithelial (MCF-7) 107856557
chr1 201494127 201494845 ZNF143 GTRD no Epithelial (MCF-7) 107856560
chr1 201494188 201494838 ZNF143 GTRD no Epithelial (MCF-7) 107856562
chr1 201494266 201494816 ZNF143 GTRD no Epithelial (MCF-7) 107856569
chr1 201494805 201494810 MYB TRANSFAC yes 34502076
chr1 201494806 201494815 NKX2-8 JASPAR yes 34502077
chr1 201494806 201494816 NKX2-3 JASPAR yes 34502078
Genes associated with rs201403072[chr1:201494807], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More