EnhancerDB
  1. Home
  2. SNP
  3. rs201456244[chr1:225648520]
Enhancers that have rs201456244[chr1:225648520]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201456244[chr1:225648520]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225648438 225648758 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384809
chr1 225648519 225648532 TFAP2A JASPAR yes 35743258
chr1 225648520 225648534 PLAG1 JASPAR yes 35743259
Genes associated with rs201456244[chr1:225648520], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More