EnhancerDB
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  3. rs201479890[chr17:65436011]
Enhancers that have rs201479890[chr17:65436011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65424869 65443995 enh17322
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs201479890[chr17:65436011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65435998 65436013 FOXP1 JASPAR yes 55504338
chr17 65435999 65436020 IRF1 JASPAR yes 55504339
chr17 65436004 65436019 FOXP1 JASPAR yes 55504341
chr17 65436008 65436023 FOXP1 JASPAR yes 55504342
chr17 65436009 65436020 FOXA1 JASPAR yes 55504343
chr17 65436009 65436024 FOXA1 JASPAR yes 55504344
chr17 65436010 65436022 FOXC2 JASPAR yes 55504345
chr17 65436010 65436030 RREB1 JASPAR yes 55504346
chr17 65436011 65436023 FOXI1 JASPAR yes 55504347
chr17 65436011 65436031 RREB1 JASPAR yes 55504348
Genes associated with rs201479890[chr17:65436011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More