EnhancerDB
  1. Home
  2. SNP
  3. rs201542560[chr1:9829188]
Enhancers that have rs201542560[chr1:9829188]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9816649 9832635 enh52
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs201542560[chr1:9829188]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9829172 9829193 ZNF263 JASPAR yes 26675698
chr1 9829175 9829196 ZNF263 JASPAR yes 26675700
chr1 9829176 9829197 ZNF263 JASPAR yes 26675702
chr1 9829179 9829190 FLI1 JASPAR yes 26675703
chr1 9829179 9829200 ZNF263 JASPAR yes 26675704
chr1 9829180 9829188 FEV JASPAR yes 26675706
chr1 9829181 9829196 PRDM1 JASPAR yes 26675707
chr1 9829184 9829205 ZNF263 JASPAR yes 26675708
chr1 9829188 9829199 E2F6 JASPAR yes 26675709
Genes associated with rs201542560[chr1:9829188], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More