EnhancerDB
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Enhancers that have rs201564935[chr16:85580863]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201564935[chr16:85580863]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85580040 85582876 ZNF143 GTRD no Epithelial (MCF-7) 21728618
chr16 85580050 85581468 TCF7L2 GTRD no Colon (HCT116) 21728619
chr16 85580295 85581017 ZNF274 GTRD no Bone Marrow (K562) 21728624
chr16 85580440 85582297 ZNF274 GTRD no Bone Marrow (K562) 21728625
chr16 85580441 85581465 ZNF274 GTRD no Bone Marrow (K562) 21728626
chr16 85580739 85582335 ZNF274 GTRD no Bone Marrow (K562) 21728627
chr16 85580771 85581161 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728628
chr16 85580808 85581078 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21728629
chr16 85580815 85581429 ZNF274 GTRD no Bone Marrow (K562) 21728630
chr16 85580835 85581079 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728631
chr16 85580836 85581080 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21728632
chr16 85580837 85581107 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21728633
chr16 85580840 85581070 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21728634
chr16 85580845 85581075 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21728635
chr16 85580859 85581075 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21728636
chr16 85580860 85580863 MYB TRANSFAC yes 12074842
Genes associated with rs201564935[chr16:85580863], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More