EnhancerDB
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  3. rs201584029[chr19:6100881]
Enhancers that have rs201584029[chr19:6100881]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201584029[chr19:6100881]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6100870 6100883 DUXA JASPAR yes 112257260
chr19 6100871 6100882 PHOX2A JASPAR yes 112257261
chr19 6100874 6100884 ALX3 JASPAR yes 112257262
chr19 6100874 6100884 GSX2 JASPAR yes 112257263
chr19 6100874 6100884 MIXL1 JASPAR yes 112257264
chr19 6100874 6100884 MNX1 JASPAR yes 112257265
chr19 6100875 6100883 ISX JASPAR yes 112257266
chr19 6100875 6100883 LHX9 JASPAR yes 112257267
chr19 6100875 6100883 LMX1B JASPAR yes 112257268
chr19 6100875 6100883 PRRX1 JASPAR yes 112257269
chr19 6100875 6100883 RAX2 JASPAR yes 112257270
chr19 6100875 6100883 SHOX JASPAR yes 112257271
chr19 6100875 6100883 UNCX JASPAR yes 112257272
chr19 6100875 6100888 DUXA JASPAR yes 112257273
chr19 6100876 6100887 DUX4 JASPAR yes 112257274
chr19 6100876 6100887 PHOX2A JASPAR yes 112257275
chr19 6100876 6100887 PROP1 JASPAR yes 112257276
chr19 6100878 6100883 MYB TRANSFAC yes 112257277
chr19 6100879 6100892 DUXA JASPAR yes 112257278
chr19 6100880 6100891 PHOX2A JASPAR yes 112257279
chr19 6100881 6100891 PAX3 JASPAR yes 112257280
chr19 6100881 6100891 PAX7 JASPAR yes 112257281
Genes associated with rs201584029[chr19:6100881], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More