EnhancerDB
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  3. rs201650106[chr15:40368948]
Enhancers that have rs201650106[chr15:40368948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201650106[chr15:40368948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40366783 40369415 TCF7L2 GTRD no Colon (HCT116) 21649889
chr15 40366811 40368964 TCF7L2 GTRD no Colon (HCT116) 21649890
chr15 40366929 40369193 ZNF274 GTRD no Bone Marrow (K562) 21649893
chr15 40366947 40369135 ZNF274 GTRD no Bone Marrow (K562) 21649894
chr15 40367139 40369222 ZNF274 GTRD no Blood (GM12878) 21649896
chr15 40367303 40369609 TCF7L2 GTRD no Colon (HCT116) 21649898
chr15 40367308 40369218 ZNF274 GTRD no Bone Marrow (K562) 21649899
chr15 40367330 40369273 ZNF274 GTRD no Cervix (HeLa-S3) 21649900
chr15 40367438 40369142 TCF7L2 GTRD no Colon (HCT116) 21649908
chr15 40367511 40369141 ZNF274 GTRD no Bone Marrow (K562) 21649914
chr15 40367647 40369172 ZNF274 GTRD no Blood (GM12878) 21649940
chr15 40367751 40369015 ZNF274 GTRD no Bone Marrow (K562) 21649970
chr15 40367929 40369039 ZNF274 GTRD no Bone Marrow (K562) 21649999
chr15 40368074 40368988 ZNF274 GTRD no Liver (HepG2) 21650045
chr15 40368855 40369141 ZNF274 GTRD no Bone Marrow (K562) 21650067
chr15 40368931 40369039 ZNF274 GTRD no Liver (HepG2) 21650068
chr15 40368946 40368961 FOXP1 JASPAR yes 22927114
Genes associated with rs201650106[chr15:40368948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More