EnhancerDB
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  3. rs201672035[chr1:224383245]
Enhancers that have rs201672035[chr1:224383245]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs201672035[chr1:224383245]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224383234 224383255 IRF1 JASPAR yes 35692321
chr1 224383236 224383251 STAT2 JASPAR yes 35692322
chr1 224383237 224383251 STAT1 JASPAR yes 35692323
chr1 224383238 224383250 IRF1 JASPAR yes 35692324
chr1 224383238 224383253 IRF9 JASPAR yes 35692325
chr1 224383240 224383261 IRF1 JASPAR yes 35692326
chr1 224383245 224383266 IRF1 JASPAR yes 35692327
Genes associated with rs201672035[chr1:224383245], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More