EnhancerDB
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Enhancers that have rs201717954[chr1:203643241]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203628785 203657695 enh12563
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr1 203643182 203643803 vista4654
VISTA
Transcript factors that have rs201717954[chr1:203643241]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203642764 203643940 ZNF143 GTRD no Epithelial (MCF-7) 21369752
chr1 203642764 203643940 ZNF143 GTRD no Epithelial (MCF-7) 107859247
chr1 203642824 203643881 ZNF143 GTRD no Epithelial (MCF-7) 21369753
chr1 203642824 203643881 ZNF143 GTRD no Epithelial (MCF-7) 107859248
chr1 203642827 203644353 P63 GTRD no Skin (Keratinocyte) 21369754
chr1 203642827 203644353 P63 GTRD no Skin (Keratinocyte) 107859249
chr1 203642863 203643894 ZNF143 GTRD no Epithelial (MCF-7) 21369755
chr1 203642863 203643894 ZNF143 GTRD no Epithelial (MCF-7) 107859250
chr1 203642867 203643852 ZNF143 GTRD no Epithelial (MCF-7) 21369756
chr1 203642867 203643852 ZNF143 GTRD no Epithelial (MCF-7) 107859251
chr1 203642895 203643888 ZNF143 GTRD no Epithelial (MCF-7) 21369757
chr1 203642895 203643888 ZNF143 GTRD no Epithelial (MCF-7) 107859252
chr1 203642899 203643549 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369758
chr1 203642899 203643549 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859253
chr1 203642901 203643988 ZNF143 GTRD no Epithelial (MCF-7) 21369759
chr1 203642901 203643988 ZNF143 GTRD no Epithelial (MCF-7) 107859254
chr1 203642929 203644021 ZNF143 GTRD no Epithelial (MCF-7) 21369760
chr1 203642929 203644021 ZNF143 GTRD no Epithelial (MCF-7) 107859255
chr1 203642939 203643326 ZNF143 GTRD no Epithelial (MCF-7) 21369761
chr1 203642939 203643326 ZNF143 GTRD no Epithelial (MCF-7) 107859256
chr1 203642941 203644098 ZNF143 GTRD no Epithelial (MCF-7) 21369762
chr1 203642941 203644098 ZNF143 GTRD no Epithelial (MCF-7) 107859257
chr1 203642951 203643798 ZNF143 GTRD no Epithelial (MCF-7) 21369763
chr1 203642951 203643798 ZNF143 GTRD no Epithelial (MCF-7) 107859258
chr1 203642964 203643835 ZNF143 GTRD no Epithelial (MCF-7) 21369764
chr1 203642964 203643835 ZNF143 GTRD no Epithelial (MCF-7) 107859259
chr1 203642985 203643759 ZNF143 GTRD no Epithelial (MCF-7) 21369765
chr1 203642985 203643759 ZNF143 GTRD no Epithelial (MCF-7) 107859260
chr1 203642990 203643987 ZNF143 GTRD no Epithelial (MCF-7) 21369766
chr1 203642990 203643987 ZNF143 GTRD no Epithelial (MCF-7) 107859261
chr1 203643026 203643650 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21369767
chr1 203643026 203643650 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859262
chr1 203643027 203643446 ZNF274 GTRD no Bone Marrow (K562) 21369768
chr1 203643027 203643446 ZNF274 GTRD no Bone Marrow (K562) 107859263
chr1 203643033 203643888 ZNF143 GTRD no Epithelial (MCF-7) 21369769
chr1 203643033 203643888 ZNF143 GTRD no Epithelial (MCF-7) 107859264
chr1 203643037 203644364 P63 GTRD no Skin (Keratinocyte) 21369770
chr1 203643037 203644364 P63 GTRD no Skin (Keratinocyte) 107859265
chr1 203643044 203643480 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21369771
chr1 203643044 203643480 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859266
chr1 203643068 203643896 ZNF143 GTRD no Epithelial (MCF-7) 21369772
chr1 203643068 203643896 ZNF143 GTRD no Epithelial (MCF-7) 107859267
chr1 203643078 203643719 ZNF143 GTRD no Epithelial (MCF-7) 21369773
chr1 203643078 203643719 ZNF143 GTRD no Epithelial (MCF-7) 107859268
chr1 203643088 203643488 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21369774
chr1 203643088 203643488 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859269
chr1 203643095 203643522 ZBTB33 GTRD no Lung (A549) 107859270
chr1 203643097 203643473 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21369775
chr1 203643097 203643473 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859271
chr1 203643102 203644260 P63 GTRD no Skin (Keratinocyte) 21369776
chr1 203643102 203644260 P63 GTRD no Skin (Keratinocyte) 107859272
chr1 203643108 203643823 ZNF143 GTRD no Epithelial (MCF-7) 21369777
chr1 203643108 203643823 ZNF143 GTRD no Epithelial (MCF-7) 107859273
chr1 203643111 203643327 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21369778
chr1 203643111 203643327 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859274
chr1 203643125 203643610 ZBTB33 GTRD no Lung (A549) 107859275
chr1 203643126 203643636 ZNF143 GTRD no Epithelial (MCF-7) 21369779
chr1 203643126 203643636 ZNF143 GTRD no Epithelial (MCF-7) 107859276
chr1 203643127 203643789 ZNF143 GTRD no Epithelial (MCF-7) 21369780
chr1 203643127 203643789 ZNF143 GTRD no Epithelial (MCF-7) 107859277
chr1 203643130 203643597 CTCF UCSC Txn Factor no Conserved 107859278
chr1 203643145 203643695 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369781
chr1 203643145 203643695 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859279
chr1 203643161 203644272 P63 GTRD no Skin (Keratinocyte) 21369782
chr1 203643161 203644272 P63 GTRD no Skin (Keratinocyte) 107859280
chr1 203643178 203643538 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107859281
chr1 203643189 203643788 ZNF143 GTRD no Epithelial (MCF-7) 21369783
chr1 203643189 203643788 ZNF143 GTRD no Epithelial (MCF-7) 107859282
chr1 203643204 203643408 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21369784
chr1 203643204 203643408 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859283
chr1 203643217 203643673 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369785
chr1 203643217 203643673 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859284
chr1 203643222 203643512 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21369786
chr1 203643222 203643512 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107859285
chr1 203643228 203643798 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21369787
chr1 203643228 203643798 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107859286
chr1 203643230 203643500 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21369788
chr1 203643230 203643500 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859287
chr1 203643231 203643246 HSF1 JASPAR yes 34654260
chr1 203643231 203643246 HSF1 JASPAR yes 118436784
chr1 203643231 203643730 ZNF274 GTRD no Bone Marrow (K562) 21369789
chr1 203643231 203643730 ZNF274 GTRD no Bone Marrow (K562) 107859288
chr1 203643238 203643249 FLI1 JASPAR yes 34654261
chr1 203643238 203643249 FLI1 JASPAR yes 118436785
chr1 203643241 203643705 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21369790
chr1 203643241 203643705 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107859289
Genes associated with rs201717954[chr1:203643241], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More