EnhancerDB
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  3. rs201724436[chr11:62192788]
Enhancers that have rs201724436[chr11:62192788]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62190145 62243455 enh13972
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201724436[chr11:62192788]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62191966 62194844 ZNF274 GTRD no Bone Marrow (K562) 21488640
chr11 62192232 62192913 TCF7L2 GTRD no Colon (HCT116) 21488654
chr11 62192350 62192946 TCF7L2 GTRD no Colon (HCT116) 21488668
chr11 62192780 62192792 FOXC2 JASPAR yes 39198867
chr11 62192786 62192798 MEF2A JASPAR yes 39198868
chr11 62192786 62192798 MEF2B JASPAR yes 39198869
chr11 62192786 62192798 MEF2D JASPAR yes 39198870
chr11 62192788 62192799 CDX2 JASPAR yes 39198871
Genes associated with rs201724436[chr11:62192788], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More