EnhancerDB
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  3. rs201749580[chr1:27465117]
Enhancers that have rs201749580[chr1:27465117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs201749580[chr1:27465117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27465105 27465124 PAX5 JASPAR yes 27680674
chr1 27465109 27465120 NRF1 JASPAR yes 27680675
chr1 27465113 27465124 E2F4 JASPAR yes 27680676
Genes associated with rs201749580[chr1:27465117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More