EnhancerDB
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  3. rs201838805[chr17:62708125]
Enhancers that have rs201838805[chr17:62708125]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201838805[chr17:62708125]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 21779174
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 108282599
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 108282600
chr17 62702330 62708269 ZNF143 GTRD no Epithelial (MCF-7) 21779219
chr17 62702330 62708269 ZNF143 GTRD no Epithelial (MCF-7) 108282610
chr17 62702330 62708269 ZNF143 GTRD no Epithelial (MCF-7) 108282611
chr17 62707940 62712845 ZNF143 GTRD no Epithelial (MCF-7) 21779478
chr17 62708110 62708125 FOXP1 JASPAR yes 55315370
chr17 62708111 62708126 FOXP1 JASPAR yes 55315371
chr17 62708121 62708134 POU3F3 JASPAR yes 55315372
chr17 62708121 62708135 POU1F1 JASPAR yes 55315373
chr17 62708122 62708134 POU3F1 JASPAR yes 55315374
chr17 62708122 62708135 POU3F3 JASPAR yes 55315375
Genes associated with rs201838805[chr17:62708125], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More