EnhancerDB
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  3. rs201890270[chr2:223904411]
Enhancers that have rs201890270[chr2:223904411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 223899494 223911408 enh34310
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Lung (PC-9) Astrocyte Bone (Osteoblast) Muscle (A673) Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs201890270[chr2:223904411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 223904394 223904415 IRF1 JASPAR yes 81234274
chr2 223904397 223904411 IRF7 JASPAR yes 81234276
chr2 223904399 223904411 IRF1 JASPAR yes 81234277
chr2 223904400 223904415 FOXP1 JASPAR yes 81234278
chr2 223904400 223904415 MEF2C JASPAR yes 81234279
chr2 223904400 223904421 IRF1 JASPAR yes 81234280
chr2 223904401 223904416 MEF2A JASPAR yes 81234281
chr2 223904401 223904422 IRF1 JASPAR yes 81234282
chr2 223904402 223904414 FOXC2 JASPAR yes 81234283
chr2 223904402 223904414 MEF2A JASPAR yes 81234284
chr2 223904402 223904414 MEF2B JASPAR yes 81234285
chr2 223904402 223904414 MEF2D JASPAR yes 81234286
chr2 223904403 223904413 MEF2A JASPAR yes 81234287
chr2 223904404 223904419 FOXP1 JASPAR yes 81234288
chr2 223904407 223904428 IRF1 JASPAR yes 81234289
chr2 223904410 223904416 TBP TRANSFAC yes 81234290
chr2 223904411 223904426 FOXP1 JASPAR yes 81234291
Genes associated with rs201890270[chr2:223904411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More