EnhancerDB
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  3. rs201989541[chr3:123324314]
Enhancers that have rs201989541[chr3:123324314]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 123311925 123328095 enh7496
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr3 123324068 123324437 vista42203
VISTA
Transcript factors that have rs201989541[chr3:123324314]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 123323997 123324343 CEBPB UCSC Txn Factor no Conserved 108530098
chr3 123324028 123324418 EP300 UCSC Txn Factor no Conserved 108530099
chr3 123324063 123324327 FOXA1 UCSC Txn Factor no Conserved 108530100
chr3 123324069 123324315 FOXA2 UCSC Txn Factor no Conserved 108530101
chr3 123324094 123324389 FOSL2 UCSC Txn Factor no Conserved 108530102
chr3 123324158 123324343 FOS UCSC Txn Factor no Conserved 108530103
chr3 123324299 123324320 IRF1 JASPAR yes 5329697
chr3 123324299 123324320 IRF1 JASPAR yes 71041011
chr3 123324301 123324316 STAT2 JASPAR yes 5329698
chr3 123324301 123324316 STAT2 JASPAR yes 71041012
chr3 123324305 123324320 MEF2A JASPAR yes 5329699
chr3 123324305 123324320 MEF2A JASPAR yes 71041013
chr3 123324306 123324321 MEF2C JASPAR yes 5329700
chr3 123324306 123324321 MEF2C JASPAR yes 71041014
chr3 123324307 123324319 MEF2D JASPAR yes 5329701
chr3 123324307 123324319 MEF2D JASPAR yes 71041015
chr3 123324308 123324318 MEF2A JASPAR yes 5329702
chr3 123324308 123324318 MEF2A JASPAR yes 71041016
chr3 123324308 123324322 POU1F1 JASPAR yes 5329703
chr3 123324308 123324322 POU1F1 JASPAR yes 71041017
Genes associated with rs201989541[chr3:123324314], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More